Blacked engine & trans, blue thread CF bits as previously noted (including heel guards/exh heat shields, tank center, headlight surround, belly pan, seat cowl), long sport suspension as noted, and 5.5" wheel. no CF instrument surround or turn signal pods. no R1100S models came from factory with a rear hugger.
mine came with larger alternator, ABS, low bars, damper & "normal" length torque arm. I have added some things, including heated grips, and a c-stand that finds its way onto the bike when i am more than a day away from home.
200 made is the number i've always heard, but never confirmed.
the day i bought it in the Bronx in 2002, less than 4K miles

a coupla years ago:

this fall, with 77K on it: